Categories
Latest Posts
Running Cromwell on AWS/Batch
- Posted: 2018-11-21.
Parallel mysql myisam repair
- Posted: 2018-11-21.
Does a TKI like Crizotinib kill tumor cells ?
- Posted: 2018-10-28.
Save Spotify to flac or mp3
- Posted: 2018-07-14.
Replace all symlinks by the original file
- Posted: 2018-03-02.
Tag Collection
telenet proftpd dos2unix line-end AWS PHP timer VMplayer FTP spotify NGS Searching Apache cotd api bioinformatics Conky compress Yelo.tv python Password fancy preamble indent XFS javascript todo.txt Linespacing docker HPC CPAN Installation mysql spam cloudformation GATK mpd fuzzy match Remote NSCLC SLURM bibtex terraform BASH cromwell osd_cat Silverlight NFS Batch tikz Typesetting Headless galaxy whitespace drmaa R LaTeX Recovery ExecOnCommand torque/pbs antialias Rcran levenshtein Literature Paired-End Image Cluster windows apoptosis sudoers Perl Ubuntu natbib TrainOfThought VMware
Log in
All Entries On GATK
A total of 2 entries were found. Click on the titles to read the posts.
- Creating GATK VQSR plots (2013-05-15 - Geert Vandeweyer)
GATK provides nice plots on the gaussian distributions used by the variant quality recalibration tool.
However, coverting the R-scripts to the actual pdf plots proved n...
- Running Cromwell on AWS/Batch (2018-11-21 - Geert Vandeweyer)
Cromwell is one of the widely used workflow managers used in bioinformatics to run NGS analysis pipelines. Based on the WDL workflow language, it supports runnings tasks as regular scripts or as co...
